A bit of background information: this is a meeting I am really happy to be part of, and even more so honored to be a co-organizer. One of my main scientific interests is the prediction of the function of genes and proteins of unknown function. Some background information: we have sequenced more than 1000 genomes […]
There are few infectious diseases as violent and as lethal as the Ebola Haemorragic Fever. This terrible disease was first described in 1976 at a mission hospital at the Ebola river in Zaire (now the Democratic Republic of Congo). The disease is 80% fatal, the victims die painfully from a literal meltdown of their organs. […]
In case you have been vacationing in a parallel universe in the past two days, you should have heard about the new synthetic bacterium created at the J Craig Venter Institute. In a nutshell, the scientific team synthesized an artificial chromosome of the bacterium Mycoplasma mycoides and transferred it to another bacterium, Mycoplasma capricolum. The […]
Speaking of sampling bacteria, this ties in well with the previous post about GEBA. And by “well” I mean “in an alternate-universe/ altered-consciousness manner”. The voices in the song are sampled from this KFC employee training tape. The video won a prize in machinima.com. So if you like World of Warcraft, bacteria, KFC, sampled music, […]
After hearing Jonathan Eisen and Nikos Kyripdes talk about GEBA in various meetings, it is great to see the paper finally come out, and under a CC license too. Good move for everyone. GEBA is the Genomic Encyclopedia of Bacteria and Archaea. The idea is simple: we have >1000 prokaryotic genomes in GenBank as of […]
Blog Action Day focuses this year on climate change, which, like everything else on this planet, is also a microbial matter. Howzat? Methane (CH4) is a greenhouse gas which has heat retention capability 23 times of that of CO2. Soil methanogens are the chief global producers of methane. There are an estimated 7.5x 109 tons […]
Quorum sensing Social behavior is not exactly the first term that comes to mind with relation to microbes. After all, we assume a certain amount of intelligence and an ability to implement a behavioral pattern in response to peer actions. Humans, yes. Apes, yes. Birds of a feather flock together… so birds, yes. Ants and […]
(Full disclosure before I start: I am an academic editor in PLoS ONE. I have no financial stake in PLoS, and as far as I know, they have none in me. They’d better not, if they know what’s good for them). PLoS have come up with yet another cool mechanism for scientific communication: PLoS Currents. […]
We are “going up” the Grand Staircase in Utah now. After Zion, we hiked in Bryce Canyon, and tomorrow we will explore the area around Escalante and Capitol Reef. While constantly bombarded by the grand geological marvels of these places, it’s probably important to keep track of some small things. Like this leaf -mimicking grasshopper […]
