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Health

Playboy Pleasure Palace Provides Pneumophila?

It seems like an outbreak of Legionnaire’s disease (in a mild form, Pontiac Fever)  has occurred at the DOMAINFest this year at Santa Monica, California. Legionnaire’s disease  is caused by gram-negative bacterium, Legionlla pneumophila. Legionella typically inhabits the water tanks of central air conditioning systems, but any aerosolized  fresh water such as from fog machines […]

Lake Arrowhead Microbial Genomics Conference

Quick post: at the Lake Arrowhead Microbial Genomics Conference. I’m a bad microblogger, but thankfully Jonathan Eisen and Ruchira Datta are doing a great job of covering this conference live. There is a friendfeed room. The Twitter hashtag is #LAMG10.  The science, people, food and location are all great. My student, David Ream, is presenting […]

It’s a small (RNA) world after all

The central dogma of molecular biology edit: the sequence hypothesis (thanks for setting me straight, Kamel!) as formulated 57 years ago was simple: DNA is transcribed to mRNA,and  mRNA is translated to proteins. Proteins are the business end of this process. mRNA is only the messenger: its sole function is to deliver information from the […]

Celebromics? HeavyMetalomics? Advertomics? Anniversomics!

René Goscinny would probably have done a better job of naming the new trend of personal genomics (genomix?) companies to sequence celebrities genomes. Heck, we might have even done Obelix’s  and Asterix’s genomes to find out  if Obelix can drink the magic potion without Getafix’s (Panoramix’s) admonishments that it might do him harm, or to […]

New poll: would you make your genome public?

Would you have your genome sequenced for free?  Conditions: you must license it for all use; a liberal CC-no attribution-like license which allows for commercial use as well. Also, your genome will be made public with many personal data  such as age, height, sex, weight, ethnicity, personal status (we want to find the “money making […]

Obesity: the role of the immune system

Obesity is one symptom of several, which together constitute what is now termed metabolic syndrome. Morbid obesity is also associated with a host of other symptoms including high blood sugar, high blood lipids, insulin resistance  and liver disorders. The root causes of which are traced back to excessive food consumption, reduced physical activity and in […]

Colbert on Gene Patents

Recently, a judge in Federal District Court in Manhattan ruled that Myriad’s patents on BRCA1 and BRCA2 genes were invalid, being a “products of the law nature” and could be patented no more than, say, mount Everest. These two genes are associated with breast and ovarian cancer, and are used in testing for susceptibility to […]

Florence Nightingale, medical statistician

She is a ‘ministering angel’ without any exaggeration in these hospitals, and as her slender form glides quietly along each corridor, every poor fellow’s face softens with gratitude at the sight of her. When all the medical officers have retired for the night and silence and darkness have settled down upon those miles of prostrate […]

A sh*tload of data

There are more microbial cells in our body than our own. Those microbes are not just passive hitchhikers or conversely, malicious agents of disease. They affect our well-being and health in a much broader spectrum than simply “bad” or “passive”. Among other things our gut microbes play an important role in digestion, have been linked […]

The polypharmacome

Pharmaceutical companies are always on the lookout for secondary drug targets. After all, if you invest billions developing a single drug, you would be more than happy to sell it as a treatment for two, three, or more different ailments. Sildenafil citrate was developed to treat angina and hypertension, but during phase I clinical trials, […]

WoW is full of bacteria

Speaking of sampling bacteria, this ties in well with the previous post about GEBA. And by “well” I mean “in an alternate-universe/ altered-consciousness manner”. The voices in the song are sampled from this KFC employee training tape. The video won a prize in machinima.com. So if you like World of Warcraft, bacteria, KFC, sampled music, […]

Richard Dawkins and Francis Collins on Colbert Nation

Stephen Colbert had an interesting lineup for the past two nights: Richard Dawkins on Sep 30, and Francis Collins last night. Enjoy the vids: The Colbert Report Mon – Thurs 11:30pm / 10:30c

Weekly Poll: will you have your own genome sequenced?

CLARIFICATION: the events described here have not happened. Yet. We are a few years into the future. Whole human genomes can be sequenced relatively cheaply and accurately. Direct to Consumer Genomics companies offer true genomic analyses now, not just marker analyses. They BLAST* your sequence against known genotype & disease databases, looking for known genotypic […]

PLoS Currents: Influenza. Because knowledge should travel faster than epidemics

(Full disclosure before I start: I am an academic editor in PLoS ONE. I have no financial stake in PLoS, and as far as I know, they have none in me. They’d better not, if they know what’s good for them). PLoS have come up with yet another cool mechanism for scientific communication: PLoS Currents. […]

Hamburgers are pathological

From Annals of Diagnostic Pathology. This is what happens when you bring a pathologist to a fast food joint. Hat tip to Laura for pointing this out. Here were my initial thoughts about these findings. “Bleaaachhhh!” (I’m very verbal when reading scientific papers). Well, it looks bad.. but. But. Cooked ground beef can have up […]